Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017657.1 Corchorus olitorius cultivar O-4 contig17690, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18305

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3521--3552
16
1.9
17
93
6
57
81
0
9
9
0.88
12662--12744
39
2.1
39
100
0
166
43
19
4
32
1.72
14068--14181
39
2.9
39
96
0
210
31
7
28
31
1.86
15669--15793
28
4.5
28
91
0
106
40
22
16
20
1.92
15669--15798
56
2.3
56
84
2
145
38
23
16
20
1.93
15696--15798
28
3.7
28
94
0
161
37
24
17
20
1.93

Tables:   1

The End!