Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017661.1 Corchorus olitorius cultivar O-4 contig17694, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52678

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1620--1760
72
2.0
72
98
0
273
29
19
23
27
1.98
11421--11454
15
2.1
16
89
10
52
61
0
2
35
1.11
15451--15608
80
2.0
80
91
0
253
32
11
14
41
1.81
23872--23901
1
30.0
1
100
0
60
0
0
0
100
0.00
27720--27756
14
2.7
13
91
8
56
70
0
2
27
1.01
30259--30286
6
4.7
6
100
0
56
32
32
17
17
1.94
30576--30653
36
2.2
36
86
4
104
32
23
15
29
1.95
30813--30946
36
3.7
36
92
3
207
32
25
6
35
1.82
30819--30946
13
10.5
13
73
13
94
33
24
7
35
1.82
30813--30946
73
1.9
71
90
3
214
32
25
6
35
1.82
38773--38926
52
3.0
52
90
1
229
29
23
29
17
1.97
42604--42643
15
2.6
16
88
4
55
62
12
10
15
1.54
48200--48241
15
2.7
15
92
3
66
64
14
9
11
1.50
50316--50406
46
1.9
48
84
8
125
60
16
5
17
1.54
50698--50737
15
2.6
16
88
4
55
62
12
10
15
1.54
52400--52677
45
6.2
45
94
0
493
34
23
30
11
1.90

Tables:   1

The End!