Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017666.1 Corchorus olitorius cultivar O-4 contig17699, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12509

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2070--2105
16
2.2
16
95
0
63
11
19
25
44
1.83
5854--5930
12
6.4
12
78
0
73
29
22
1
46
1.60
5947--5992
24
1.9
24
86
0
65
36
36
4
21
1.74
6026--6077
24
2.2
24
85
0
68
21
38
1
38
1.64
7461--7497
19
1.9
19
88
0
56
40
10
13
35
1.80
7842--7887
8
5.8
8
100
0
92
23
26
13
36
1.91
12473--12509
1
37.0
1
94
0
65
97
0
0
2
0.18

Tables:   1

The End!