Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017667.1 Corchorus olitorius cultivar O-4 contig17700, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35302

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1388--1420
16
2.0
17
88
5
50
78
3
18
0
0.87
7540--7917
66
5.7
66
85
0
461
34
15
29
21
1.94
7540--7917
198
1.9
198
84
2
508
34
15
29
21
1.94
11887--11922
16
2.2
16
100
0
72
0
47
5
47
1.25
12788--12860
36
2.0
36
91
0
119
26
15
16
42
1.87
14180--14213
16
2.1
16
88
0
50
14
41
20
23
1.89
16945--16975
2
15.5
2
100
0
62
48
0
0
51
1.00
17503--17548
21
2.2
21
100
0
92
23
21
17
36
1.94
17765--17794
16
1.9
15
93
6
51
73
0
0
26
0.84
17741--17790
22
2.3
22
82
6
57
64
0
0
36
0.94
26146--26182
19
1.9
19
100
0
74
48
10
16
24
1.77
29171--29202
16
2.0
16
93
0
55
46
0
12
40
1.42
30888--30945
29
2.0
29
100
0
116
27
6
3
62
1.37
35259--35301
2
21.5
2
100
0
86
48
0
0
51
1.00

Tables:   1

The End!