Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017696.1 Corchorus olitorius cultivar O-4 contig17729, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16698

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3809--3839
2
15.5
2
100
0
62
48
0
0
51
1.00
9237--9261
2
12.5
2
100
0
50
48
0
0
52
1.00
11108--11179
4
17.8
4
79
2
81
73
0
4
22
1.00
11104--11227
8
16.4
8
75
11
84
64
0
11
24
1.26
11240--11290
18
2.7
19
81
3
59
58
1
9
29
1.41
11257--11319
27
2.4
27
84
7
85
61
1
6
30
1.30
11276--11339
30
2.2
30
83
8
78
65
0
6
28
1.16
12673--13306
54
11.7
54
86
3
496
33
23
17
26
1.96
13067--13345
108
2.6
108
89
1
398
37
20
16
25
1.93
13408--13451
22
2.0
22
82
8
54
15
29
6
47
1.72
14740--14798
19
3.1
19
79
16
68
10
22
0
67
1.20
15139--15189
15
3.3
15
86
8
59
39
21
9
29
1.85
15149--15197
16
3.2
15
86
11
64
32
20
10
36
1.86
16224--16272
15
3.0
16
82
14
64
51
0
12
36
1.40

Tables:   1

The End!