Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017701.1 Corchorus olitorius cultivar O-4 contig17734, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46435

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5332--6190
435
2.0
435
90
0
1362
44
16
17
22
1.87
17564--17600
18
2.1
18
89
0
56
45
5
10
37
1.62
30413--30438
2
13.0
2
100
0
52
50
0
0
50
1.00
37519--37654
38
3.6
38
91
2
211
24
17
34
23
1.96
37684--37727
6
7.3
6
100
0
88
15
0
34
50
1.45
37799--37850
22
2.4
22
100
0
104
28
17
21
32
1.96
43779--43897
27
4.4
27
94
0
202
18
40
21
20
1.92
46283--46408
32
4.0
31
85
4
146
33
23
19
23
1.97
46288--46408
64
1.9
64
86
6
174
31
24
19
23
1.98
46283--46435
32
4.8
32
79
9
141
32
24
20
22
1.98
46296--46435
64
2.2
64
82
10
162
29
25
20
25
1.99

Tables:   1

The End!