Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017702.1 Corchorus olitorius cultivar O-4 contig17735, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35626

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2615--2758
76
1.9
76
81
8
177
17
29
29
23
1.97
12197--12295
51
1.9
51
81
4
119
23
21
14
41
1.89
13905--13934
2
15.0
2
92
0
51
46
3
0
50
1.18
15660--16217
67
8.4
66
77
8
396
22
18
16
42
1.89
23013--23051
18
2.1
19
95
4
71
20
15
48
15
1.81
24477--24559
27
3.1
27
60
13
64
27
10
19
42
1.84
24460--24564
52
2.0
52
94
0
183
30
10
20
38
1.87
25264--25346
42
2.0
42
80
7
96
48
10
10
30
1.72
26722--26766
11
4.0
11
85
2
54
57
17
8
15
1.63
27999--28056
16
3.7
15
76
15
55
8
3
8
79
1.04

Tables:   1

The End!