Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017709.1 Corchorus olitorius cultivar O-4 contig17742, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35212

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3217--3259
15
2.8
15
85
3
50
55
32
6
4
1.47
3906--4074
85
2.0
85
86
2
234
50
2
14
33
1.55
6300--6328
2
14.5
2
100
0
58
48
0
0
51
1.00
10216--10260
21
2.1
21
91
0
72
26
4
42
26
1.74
10512--10536
12
2.1
12
100
0
50
16
16
32
36
1.90
33067--33099
2
16.5
2
100
0
66
51
0
0
48
1.00

Tables:   1

The End!