Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017710.1 Corchorus olitorius cultivar O-4 contig17743, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35946

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7--67
2
30.5
2
100
0
122
0
50
0
49
1.00
11146--11200
21
2.6
21
80
13
60
10
1
32
54
1.46
16971--16996
13
2.0
13
100
0
52
53
15
15
15
1.73
26803--26880
31
2.5
31
78
0
84
42
19
11
26
1.85
30170--30202
2
17.0
2
93
6
59
51
0
0
48
1.00
32384--32475
46
2.0
48
89
4
143
34
17
16
31
1.92

Tables:   1

The End!