Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017716.1 Corchorus olitorius cultivar O-4 contig17749, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25602

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1383--1415
3
11.0
3
100
0
66
0
33
0
66
0.92
8840--8887
24
2.0
24
83
0
60
43
29
14
12
1.82
20220--20255
6
6.0
6
100
0
72
16
33
16
33
1.92
21000--21056
12
4.5
12
81
12
69
24
15
8
50
1.72
21006--21058
27
2.0
26
92
3
88
22
18
9
49
1.76

Tables:   1

The End!