Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017718.1 Corchorus olitorius cultivar O-4 contig17751, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20295

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
175--278
22
4.8
22
72
7
79
40
7
9
42
1.66
336--374
2
19.5
2
100
0
78
48
0
0
51
1.00
1511--1563
26
2.0
26
100
0
106
16
7
15
60
1.57
6823--6933
49
2.3
49
84
6
136
28
14
19
36
1.91
6912--6999
22
4.0
22
74
21
94
31
9
17
42
1.80
6926--7013
44
2.0
44
97
0
167
31
9
17
42
1.80
13224--13270
9
4.9
9
79
20
51
31
2
25
40
1.68
13223--13294
21
3.3
21
86
5
99
29
2
27
40
1.70
13222--13294
12
6.6
11
79
17
73
28
2
27
41
1.70

Tables:   1

The End!