Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017721.1 Corchorus olitorius cultivar O-4 contig17754, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16779

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6274--6311
19
2.0
20
85
15
53
28
5
2
63
1.30
6482--6708
22
10.2
21
68
9
96
35
8
17
38
1.80
6521--6680
66
2.4
66
81
6
180
34
8
18
38
1.81
6714--7154
22
19.9
22
72
11
238
39
9
15
35
1.81
7253--7872
22
28.4
22
69
14
191
38
10
15
36
1.81
7421--7590
23
7.5
22
83
7
164
37
9
14
38
1.79
7443--7592
46
3.3
46
86
3
198
38
10
14
38
1.79
12733--12784
22
2.4
22
83
6
61
46
9
5
38
1.61
13675--13739
22
3.0
22
86
0
94
38
16
7
36
1.78
13840--13925
43
2.0
42
82
6
102
36
19
8
36
1.82

Tables:   1

The End!