Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017728.1 Corchorus olitorius cultivar O-4 contig17761, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8707

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3871--3908
18
2.1
18
95
0
67
23
23
0
52
1.47
3903--3936
5
7.0
5
93
6
61
41
17
0
41
1.50
3903--3943
15
2.8
14
89
10
64
41
17
0
41
1.49
4736--4787
5
9.8
5
82
15
52
73
0
0
26
0.84
4736--4787
8
6.1
8
88
8
59
73
0
0
26
0.84
4736--4791
13
4.2
13
82
13
69
71
0
0
28
0.86
7639--7684
21
2.2
22
88
11
78
43
0
15
41
1.46
7676--7700
11
2.3
11
100
0
50
36
8
8
48
1.62
8499--8523
5
5.0
5
100
0
50
20
0
0
80
0.72

Tables:   1

The End!