Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017739.1 Corchorus olitorius cultivar O-4 contig17772, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28219

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--382
201
1.9
205
95
2
691
35
11
8
43
1.71
2230--2340
59
1.9
58
88
1
168
32
21
14
31
1.93
3008--3206
97
2.0
98
98
1
382
36
9
14
40
1.77
3008--3228
98
2.2
98
91
5
313
38
9
13
39
1.76
3356--3395
21
2.0
21
85
9
57
35
12
0
52
1.39
11161--11196
5
7.2
5
87
12
56
58
16
25
0
1.38
20783--20825
21
2.0
21
100
0
86
27
18
0
53
1.45

Tables:   1

The End!