Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017740.1 Corchorus olitorius cultivar O-4 contig17773, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35515

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2874--2970
40
2.4
40
96
0
176
46
11
21
20
1.82
2904--2975
22
3.5
22
67
21
73
43
9
25
22
1.83
14276--14335
30
2.1
27
87
9
84
18
13
36
31
1.89
14346--14413
21
3.2
21
66
22
61
23
13
50
13
1.76
14344--14434
42
2.2
42
100
0
182
20
15
49
14
1.79
14367--14435
21
3.3
21
66
22
63
18
15
47
17
1.82

Tables:   1

The End!