Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017744.1 Corchorus olitorius cultivar O-4 contig17777, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9229

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1516--2334
47
16.5
48
86
7
930
45
4
21
28
1.71
1612--1701
28
3.2
28
63
9
74
48
3
22
25
1.65
1868--1957
28
3.2
28
63
9
74
48
3
22
25
1.65
1516--2284
256
3.1
255
91
5
1222
45
4
21
29
1.71
2698--2809
58
1.9
57
87
8
165
32
20
14
33
1.92
3353--3377
11
2.3
11
100
0
50
44
0
20
36
1.52
8034--8109
6
12.5
6
75
15
59
77
1
21
0
0.84
8930--9004
28
2.7
28
78
12
73
36
17
9
37
1.82

Tables:   1

The End!