Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017748.1 Corchorus olitorius cultivar O-4 contig17781, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10072

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1037--1079
16
2.7
15
89
10
68
11
6
13
67
1.41
6474--6509
12
2.9
12
95
4
63
66
0
16
16
1.25
7943--8333
67
5.8
67
93
0
602
39
11
20
27
1.88
7943--8539
135
4.6
133
86
5
700
38
12
22
27
1.90
8219--8539
121
2.6
122
91
1
493
36
11
24
27
1.90
8407--8511
55
1.9
55
84
3
140
32
12
27
27
1.93
8482--8903
64
6.6
64
83
1
488
34
14
23
27
1.94
8484--8903
192
2.2
192
84
2
540
33
15
23
27
1.94
9133--9507
50
7.5
50
91
2
578
36
12
26
24
1.91

Tables:   1

The End!