Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017766.1 Corchorus olitorius cultivar O-4 contig17799, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35118

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2844--3004
70
2.3
69
92
1
268
19
29
24
26
1.98
3271--3318
23
2.1
22
85
11
62
20
18
2
58
1.49
6883--6930
19
2.5
20
80
12
57
52
2
0
45
1.12
7284--7309
13
2.0
13
100
0
52
53
30
0
15
1.42
20339--20386
19
2.5
20
80
12
57
52
2
0
45
1.12
23703--23785
41
2.0
41
83
2
105
24
14
14
46
1.81
26132--26174
17
2.4
18
78
17
54
34
2
30
32
1.71
33791--33824
2
17.0
2
100
0
68
50
0
0
50
1.00
34644--34669
7
3.7
7
100
0
52
88
0
0
11
0.52

Tables:   1

The End!