Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017767.1 Corchorus olitorius cultivar O-4 contig17800, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28350

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
905--974
36
1.9
36
88
5
106
21
10
7
61
1.51
1795--1875
39
2.0
40
92
2
137
37
3
8
50
1.51
2092--2121
6
4.8
6
95
4
51
50
0
13
36
1.42
2746--2838
31
3.0
31
85
4
118
25
29
12
32
1.93
16300--16333
16
2.1
16
89
10
52
50
2
0
47
1.16

Tables:   1

The End!