Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017768.1 Corchorus olitorius cultivar O-4 contig17801, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24121

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5347--5392
24
1.9
24
90
0
74
0
6
15
78
0.95
11803--11856
22
2.5
21
80
11
56
40
27
5
25
1.78
17643--17708
33
2.0
33
100
0
132
30
18
24
27
1.98
17837--17910
21
3.7
21
68
26
70
54
6
25
13
1.64
17909--17942
12
2.8
12
81
0
50
52
0
17
29
1.45
23119--23149
2
15.5
2
93
0
53
48
0
0
51
1.00
23693--23851
29
5.6
29
81
3
173
17
16
24
41
1.89
23691--23851
27
5.7
27
75
13
137
18
16
24
40
1.90

Tables:   1

The End!