Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017790.1 Corchorus olitorius cultivar O-4 contig17823, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5144

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
535--864
62
5.3
62
95
0
590
32
15
16
35
1.90
847--911
30
2.2
30
97
0
121
29
20
20
30
1.97
857--926
30
2.6
26
82
13
81
27
15
24
32
1.95
2075--2133
22
2.5
24
78
15
61
23
22
5
49
1.70
4270--4337
25
2.7
27
72
19
74
38
2
0
58
1.13

Tables:   1

The End!