Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017795.1 Corchorus olitorius cultivar O-4 contig17828, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7921

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
279--348
36
1.9
36
91
0
113
21
10
8
60
1.55
829--1240
206
2.0
201
95
2
734
43
8
11
36
1.71
1313--1359
25
1.9
24
95
4
85
55
8
6
29
1.55
1174--1975
413
2.0
402
94
3
1392
43
7
9
40
1.65
1728--1774
25
1.9
24
95
4
85
55
8
6
29
1.55
1765--1845
39
2.0
40
90
2
128
38
3
7
50
1.48
4648--4687
19
2.1
19
100
0
80
42
0
17
40
1.49
6146--6729
22
26.4
22
69
11
178
36
15
11
36
1.84

Tables:   1

The End!