Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017796.1 Corchorus olitorius cultivar O-4 contig17829, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24780

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
585--666
31
2.7
30
88
9
123
19
23
8
48
1.76
905--986
31
2.7
30
90
9
132
19
23
7
50
1.72
1225--1308
33
2.7
30
85
12
109
22
22
5
48
1.72
354--1582
320
3.8
320
96
0
2228
38
15
14
31
1.87
354--1582
642
1.9
639
95
0
2226
38
15
14
31
1.87
2603--2666
32
2.0
32
96
0
119
35
9
20
34
1.85
8437--8490
7
7.6
7
83
4
72
64
0
33
1
1.04
11750--11799
25
2.1
23
85
7
64
58
20
4
18
1.55
17580--17663
43
2.0
43
92
0
141
40
9
17
32
1.82
18813--18846
6
5.7
6
89
0
50
91
8
0
0
0.43

Tables:   1

The End!