Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017805.1 Corchorus olitorius cultivar O-4 contig17838, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12126

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2802--2846
7
6.3
7
92
5
72
28
11
33
26
1.91
2991--3021
15
2.1
15
93
0
53
41
3
6
48
1.45
3588--3615
2
14.0
2
100
0
56
50
0
0
50
1.00
7133--7166
11
3.2
11
91
4
52
0
0
11
88
0.52
7137--7166
16
1.9
15
93
6
51
0
0
10
90
0.47
7133--7166
10
3.3
10
88
8
50
0
0
11
88
0.52
11322--11350
9
3.3
9
95
4
51
44
0
20
34
1.52

Tables:   1

The End!