Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017808.1 Corchorus olitorius cultivar O-4 contig17841, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38541

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5384--5418
11
3.2
11
87
0
52
77
0
14
8
0.99
7291--7977
371
1.9
371
96
0
1268
36
16
13
33
1.88
8644--8800
41
3.9
41
84
2
192
28
13
21
37
1.91
32906--32954
25
2.0
25
95
0
89
14
32
18
34
1.91
34545--34658
25
4.6
25
87
0
156
26
22
21
28
1.99
35693--35717
2
12.5
2
100
0
50
52
0
0
48
1.00
35789--35852
32
2.0
32
90
0
101
50
4
6
39
1.49

Tables:   1

The End!