Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017810.1 Corchorus olitorius cultivar O-4 contig17843, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31400

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
223--270
24
2.0
24
100
0
96
29
20
16
33
1.95
609--743
69
2.0
69
92
0
225
42
18
8
29
1.80
3088--3139
26
2.0
26
100
0
104
38
3
19
38
1.70
20089--20113
2
12.5
2
100
0
50
52
0
0
48
1.00
20087--20137
10
5.3
10
83
9
52
50
13
0
35
1.42
27890--27951
32
2.0
31
87
9
90
29
8
19
43
1.79
30889--30927
11
3.5
11
85
0
51
46
25
20
7
1.77

Tables:   1

The End!