Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017815.1 Corchorus olitorius cultivar O-4 contig17848, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3112

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
363--464
22
4.6
22
66
16
66
38
10
13
37
1.80
483--529
21
2.2
22
88
3
69
38
6
21
34
1.79
591--671
22
3.5
22
71
23
67
39
8
9
41
1.69
621--777
22
7.1
22
73
7
97
34
10
18
36
1.86
2980--3057
22
3.5
22
82
3
77
35
7
14
42
1.74

Tables:   1

The End!