Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017817.1 Corchorus olitorius cultivar O-4 contig17850, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13856

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2821--2876
22
2.5
22
94
0
94
7
12
55
25
1.62
2821--2887
22
3.0
22
86
4
64
8
11
53
25
1.66
4960--4999
20
2.0
20
100
0
80
40
5
10
45
1.60
6333--6367
18
1.9
18
88
0
52
48
20
8
22
1.76
6874--6934
27
2.3
26
83
16
72
45
1
8
44
1.43
7271--7310
16
2.6
16
96
4
73
37
7
5
50
1.53
7585--7632
16
3.0
16
82
14
55
41
2
0
56
1.11
10207--10238
16
2.0
16
100
0
64
50
6
12
31
1.65
10386--10428
22
2.0
22
90
0
68
13
0
20
65
1.27
13462--13856
209
1.9
209
99
0
781
30
19
26
24
1.98

Tables:   1

The End!