Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017818.1 Corchorus olitorius cultivar O-4 contig17851, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20064

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5818--5888
35
2.1
34
91
2
115
54
9
1
33
1.42
6831--6871
22
2.0
22
90
9
68
21
24
19
34
1.97
9027--9071
6
7.5
6
90
9
58
31
0
0
68
0.89
9897--9994
22
4.4
22
83
7
101
41
16
25
16
1.88
9908--9994
44
2.0
45
84
6
115
41
16
25
17
1.89
10953--11006
17
3.4
16
73
19
51
24
11
3
61
1.46
13861--13917
25
2.4
22
77
11
60
26
5
8
59
1.48
14132--14177
23
2.0
23
100
0
92
30
26
21
21
1.99
15182--15243
21
3.1
20
73
13
56
69
4
4
20
1.26

Tables:   1

The End!