Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017819.1 Corchorus olitorius cultivar O-4 contig17852, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23666

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
721--760
21
1.9
21
94
0
71
37
7
32
22
1.82
9079--9128
27
1.9
27
84
8
68
24
30
0
46
1.53
10645--10740
33
2.9
33
95
0
165
5
31
47
15
1.67
11729--11796
27
2.5
27
92
4
102
19
47
14
19
1.83
12438--12515
21
3.7
21
100
0
156
32
5
50
12
1.63
13085--13847
298
2.6
290
81
10
875
34
13
15
35
1.87
14708--14738
3
10.3
3
100
0
62
67
0
32
0
0.91
14142--15148
303
3.3
294
83
7
1195
33
14
17
35
1.89
17528--17567
19
2.1
19
100
0
80
52
0
30
17
1.45
19328--19363
13
2.8
13
91
4
56
36
2
0
61
1.11

Tables:   1

The End!