Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017822.1 Corchorus olitorius cultivar O-4 contig17855, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3619

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--45
2
21.0
2
100
0
84
50
0
0
50
1.00
131--2653
330
7.7
328
78
7
2160
35
15
15
34
1.88
178--2559
983
2.4
966
80
7
2675
35
15
15
33
1.89
3259--3586
41
7.8
42
81
10
300
41
25
11
20
1.86
3259--3587
84
3.9
85
90
2
522
41
25
11
20
1.86

Tables:   1

The End!