Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017824.1 Corchorus olitorius cultivar O-4 contig17857, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8015

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
344--384
21
2.0
22
85
9
59
48
9
14
26
1.75
344--513
22
7.8
22
69
21
108
40
9
12
37
1.76
314--513
66
3.0
66
75
11
171
41
10
14
34
1.79
6260--6354
45
2.2
43
88
7
140
40
20
5
34
1.75

Tables:   1

The End!