Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017826.1 Corchorus olitorius cultivar O-4 contig17859, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32003

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2243--2470
67
3.3
69
91
1
352
25
23
29
20
1.99
4374--4409
16
2.2
16
90
0
54
5
41
0
52
1.24
9731--9801
37
1.9
37
100
0
142
39
25
12
22
1.89
20344--20594
22
11.7
22
71
7
149
42
15
9
32
1.79
20615--20948
22
15.1
22
67
14
143
34
17
9
38
1.82
20621--20820
112
1.8
108
82
6
258
35
20
7
36
1.81
23151--23186
16
2.2
16
100
0
72
47
5
19
27
1.72
23276--23300
8
3.1
8
100
0
50
48
0
24
28
1.52
24583--24610
12
2.3
12
100
0
56
14
0
60
25
1.34

Tables:   1

The End!