Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017827.1 Corchorus olitorius cultivar O-4 contig17860, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6768

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1032--1068
7
5.3
7
93
0
56
27
5
13
54
1.61
1119--1482
7
52.0
7
98
0
539
19
0
22
57
1.45
1618--1691
33
2.2
33
83
4
87
36
2
16
44
1.62
1798--2014
54
4.0
54
83
4
242
37
21
14
26
1.91
1812--2006
108
1.8
108
85
0
273
37
22
14
25
1.92
2020--2137
53
2.2
53
86
7
159
36
21
14
27
1.92
1870--2148
143
1.9
144
89
3
429
37
22
14
25
1.92
2275--2512
37
6.5
37
78
6
252
43
14
17
23
1.86
2205--2512
74
4.2
74
87
2
397
44
13
17
24
1.85
3557--3587
8
3.9
8
91
0
53
0
12
0
87
0.55
3556--3608
25
2.1
25
82
6
63
3
15
1
79
0.96
3556--3617
18
3.3
18
75
20
56
3
16
1
79
0.95
4261--4331
28
2.6
27
82
8
90
38
9
11
40
1.74
4261--4331
14
5.2
13
77
12
72
38
9
11
40
1.74

Tables:   1

The End!