Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017828.1 Corchorus olitorius cultivar O-4 contig17861, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37309

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1516--1564
25
2.0
25
95
0
89
12
30
20
36
1.89
4923--4952
15
2.0
15
100
0
60
20
0
13
66
1.24
6921--7225
75
4.0
75
91
1
493
21
37
14
26
1.92
19652--19686
2
18.0
2
94
5
63
48
0
0
51
1.00
26628--26655
2
14.0
2
100
0
56
50
0
0
50
1.00
26961--27102
60
2.4
60
87
2
205
32
14
15
37
1.88
34775--34886
56
2.0
56
92
3
190
34
24
2
38
1.69
34952--35032
42
1.9
42
97
0
153
29
7
16
46
1.73
36470--36581
57
2.0
57
89
5
174
36
21
0
41
1.60
36478--36589
56
2.0
57
81
6
131
39
20
0
39
1.59
36649--36733
42
2.0
41
93
2
143
30
7
17
44
1.75

Tables:   1

The End!