Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017834.1 Corchorus olitorius cultivar O-4 contig17867, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12525

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
922--1014
22
4.2
21
78
14
89
11
16
10
61
1.57
929--1045
47
2.5
46
82
8
132
9
22
8
59
1.55
4083--4167
27
3.0
26
78
17
89
23
16
12
47
1.81
4177--4426
125
2.0
125
98
0
482
25
14
17
43
1.86
9117--9256
24
5.7
24
82
5
163
22
15
41
20
1.89
9645--9776
55
2.5
52
86
7
185
21
10
14
53
1.71
10328--10440
60
1.9
60
100
0
226
30
17
15
36
1.92

Tables:   1

The End!