Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017837.1 Corchorus olitorius cultivar O-4 contig17870, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40630

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8078--8103
1
26.0
1
100
0
52
100
0
0
0
0.00
21896--21976
22
3.7
22
83
0
108
25
17
13
43
1.86
22422--22446
7
3.6
7
100
0
50
28
28
0
44
1.55
24385--24425
13
3.1
13
92
3
64
51
0
2
46
1.14
26048--26072
7
3.6
7
100
0
50
48
24
16
12
1.79
34084--34109
6
4.3
6
100
0
52
50
50
0
0
1.00
37329--37372
21
2.1
21
83
8
54
47
2
0
50
1.13
37287--37369
30
3.0
27
83
10
112
43
3
3
49
1.37
40474--40512
18
2.2
18
100
0
78
23
5
10
61
1.48

Tables:   1

The End!