Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017838.1 Corchorus olitorius cultivar O-4 contig17871, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29362

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16505--16559
29
1.9
28
88
3
83
45
1
10
41
1.50
20600--20629
15
1.9
16
93
6
53
43
0
3
53
1.17
21010--24748
333
11.3
329
76
9
2607
33
13
15
36
1.87
21361--24474
981
3.1
980
75
11
2334
33
13
15
36
1.87
23118--23145
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!