Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017843.1 Corchorus olitorius cultivar O-4 contig17876, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54086

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2969--3193
114
2.0
114
91
0
369
24
16
17
40
1.90
6114--6220
32
3.2
32
64
23
83
44
25
10
19
1.82
6116--6243
38
3.5
38
79
16
180
44
25
10
20
1.82
6116--6268
70
2.2
68
97
2
288
45
24
10
19
1.82
10573--10634
30
2.1
30
93
0
106
25
22
4
46
1.71
52060--52135
31
2.4
31
78
6
82
36
25
19
18
1.94
53139--53180
21
2.0
21
95
0
75
30
42
7
19
1.78

Tables:   1

The End!