Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017863.1 Corchorus olitorius cultivar O-4 contig17896, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61375

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46952--46994
22
1.9
23
95
4
79
37
13
23
25
1.92
49853--49982
45
2.9
45
90
2
190
41
30
4
23
1.75
50701--50743
22
1.9
23
95
4
79
37
13
23
25
1.92
51411--51445
15
2.3
15
85
0
52
45
28
5
20
1.73
53281--53340
15
4.2
14
75
12
52
31
3
45
20
1.67
53285--53324
21
1.9
21
89
0
62
30
5
42
22
1.75
53294--53340
18
2.6
18
86
0
67
31
2
46
19
1.61
55499--55593
42
2.3
42
85
3
120
15
36
6
41
1.73
60828--60908
39
2.0
40
90
2
128
50
7
4
37
1.52

Tables:   1

The End!