Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017876.1 Corchorus olitorius cultivar O-4 contig17909, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43290

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2250
331
6.8
328
75
8
1478
35
16
15
32
1.90
1--2255
672
3.4
659
76
7
1985
35
16
15
32
1.90
2380--2474
49
1.9
49
93
0
163
41
15
15
27
1.88
3822--3896
25
3.2
25
61
20
61
54
16
10
18
1.70
10607--10662
27
2.1
27
96
0
103
23
10
14
51
1.73
27676--27706
16
1.9
16
93
0
53
19
19
19
41
1.90
34926--34966
21
2.0
21
95
0
73
41
21
24
12
1.87
36139--36208
17
4.1
17
83
0
95
45
12
4
37
1.62
37163--37408
104
2.3
104
91
1
393
35
12
11
39
1.80
40912--40946
17
2.1
17
100
0
70
11
0
34
54
1.37

Tables:   1

The End!