Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017891.1 Corchorus olitorius cultivar O-4 contig17924, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33442

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
141--165
13
1.9
13
100
0
50
32
24
20
24
1.98
11589--11682
45
2.2
44
86
7
140
37
21
6
35
1.79
12883--12938
25
2.2
25
93
0
94
32
32
8
26
1.87
12891--12946
25
2.2
25
90
0
85
26
33
16
23
1.95
20279--20314
18
2.0
18
100
0
72
44
0
38
16
1.48
21300--21329
15
2.0
15
100
0
60
40
13
13
33
1.83
24446--24485
12
3.3
12
92
0
62
42
7
15
35
1.75
23057--27074
332
12.1
331
74
11
2681
33
13
15
37
1.87
27940--28033
46
2.0
46
93
0
161
35
20
10
34
1.87

Tables:   1

The End!