Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017896.1 Corchorus olitorius cultivar O-4 contig17929, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18593

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8--43
2
18.0
2
100
0
72
0
50
0
50
1.00
268--305
20
1.9
20
94
0
67
18
2
18
60
1.48
268--310
20
2.2
20
87
4
61
18
2
16
62
1.43
456--570
57
2.0
56
93
1
194
33
23
0
41
1.61
465--576
56
2.0
57
85
3
156
37
21
0
40
1.60
9363--9397
15
2.3
15
95
0
61
85
0
0
14
0.59
9359--9391
9
3.7
9
95
0
57
84
0
0
15
0.61
17804--17844
21
1.9
22
95
5
75
14
4
24
56
1.58
17806--17853
22
2.2
22
85
7
62
20
6
22
50
1.71

Tables:   1

The End!