Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01001790.1 Corchorus olitorius cultivar O-4 contig01790, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1778

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44--83
21
1.9
21
94
0
71
25
37
22
15
1.93
36--227
71
2.7
72
90
2
298
33
27
22
16
1.96
116--157
21
2.0
21
100
0
84
23
38
19
19
1.93
188--230
22
2.0
22
90
0
68
23
32
23
20
1.98
1274--1314
21
2.0
21
90
9
66
34
9
24
31
1.88

Tables:   1

The End!