Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017904.1 Corchorus olitorius cultivar O-4 contig17937, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7150

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1029--1103
29
2.5
30
86
4
98
32
18
10
38
1.85
1208--1344
31
4.4
31
87
2
186
40
11
16
31
1.84
1977--2204
126
1.8
125
84
4
316
34
10
1
52
1.47
2563--2631
29
2.3
31
90
5
106
43
13
17
26
1.85
3327--3369
21
2.1
20
91
4
68
9
25
27
37
1.87
3677--3765
44
2.0
44
95
0
160
56
3
1
39
1.23
3889--3931
22
1.9
23
95
4
79
37
13
23
25
1.92
6810--6885
30
2.5
30
89
8
111
34
28
10
26
1.90

Tables:   1

The End!