Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017912.1 Corchorus olitorius cultivar O-4 contig17945, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11623

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1331--1407
27
2.9
27
86
0
100
38
23
18
19
1.93
1851--2464
50
12.3
50
95
1
1027
26
13
30
29
1.94
2982--3133
50
3.0
50
92
3
252
36
16
15
31
1.90
3405--3448
20
2.2
20
88
8
63
11
18
0
70
1.16
3748--3778
15
2.1
15
100
0
62
12
0
6
80
0.89
3739--3799
19
3.3
19
75
6
54
16
3
13
67
1.36
6166--6207
21
2.0
22
90
4
68
33
11
30
23
1.91
8942--8992
27
1.9
26
84
4
66
35
15
0
49
1.45

Tables:   1

The End!