Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017917.1 Corchorus olitorius cultivar O-4 contig17950, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28469

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2019--2167
76
2.0
76
80
10
171
18
29
26
24
1.98
4565--4589
2
12.5
2
100
0
50
52
0
0
48
1.00
6295--6338
21
2.2
19
88
8
61
38
4
13
43
1.65
11442--11588
31
4.7
31
85
3
170
35
25
21
18
1.95
11437--11588
62
2.5
62
85
0
196
34
25
21
18
1.96
17920--18007
42
2.1
42
97
0
167
42
10
22
25
1.85
26427--26455
14
2.1
14
100
0
58
41
0
6
51
1.28

Tables:   1

The End!