Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017919.1 Corchorus olitorius cultivar O-4 contig17952, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13838

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1179--1229
21
2.5
20
81
6
59
11
11
29
47
1.76
1346--1399
23
2.4
22
82
14
65
7
9
24
59
1.54
5118--5162
21
2.2
21
80
4
56
53
13
28
4
1.59
6401--6446
21
2.2
21
84
7
58
47
17
34
0
1.48
6572--6612
21
2.0
21
85
0
55
26
26
36
9
1.88
6581--6623
21
2.0
21
81
0
50
23
27
37
11
1.89

Tables:   1

The End!