Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017950.1 Corchorus olitorius cultivar O-4 contig17983, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29617

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
180--1123
331
2.8
332
86
3
1364
35
16
13
33
1.88
2446--6130
333
11.0
330
82
7
3426
35
17
15
31
1.91
4480--6132
669
2.5
660
87
4
2287
36
17
14
32
1.90
6471--11376
333
14.9
329
76
10
3989
35
16
14
33
1.89
16123--16160
19
2.0
20
85
15
53
13
31
13
42
1.82
29578--29617
2
20.0
2
100
0
80
50
0
50
0
1.00

Tables:   1

The End!