Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017956.1 Corchorus olitorius cultivar O-4 contig17989, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23195

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--75
3
25.0
3
100
0
150
66
0
33
0
0.92
2029--2065
19
1.9
19
88
0
56
29
16
13
40
1.86
3205--3264
21
2.9
21
90
5
86
31
18
10
40
1.84
13746--13840
48
2.0
48
93
0
163
21
20
12
46
1.83
13802--14023
113
2.0
113
95
0
401
31
13
22
31
1.93
21324--21360
18
2.1
18
89
0
56
13
21
24
40
1.89
21321--21441
33
3.7
33
73
8
104
10
31
26
31
1.90
21343--21453
48
2.3
48
84
0
132
9
34
28
27
1.89
21393--21498
33
3.2
33
87
0
158
9
33
30
27
1.88
21393--21531
66
2.2
63
84
7
167
9
32
30
28
1.88

Tables:   1

The End!